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Bioinformatics 2003 Introduction A Neuroscientist's Guide to Genomic Resources. Knowledge Discovery in Medline and Other Databases. From Molecules to Brains: Navigating through Multi-resolution Imaging Data Using Knowledge-Guided Mediation. Design and Analysis of Microarray Experiments: Synthesizing Data for Research Questions. Analysis and Interpretation of Microarray Data WebQTL: A Tour of Transcriptional Networks Protein Mixture Analysis by Tandem Mass Spectrometry  Bioinformatics and Brain Imaging: Recent Advances and Neuroscience Applications  Managing Your Lab Data Flux: Getting Beyong Excel Need Help? Help with Publications Help with Nervenet Contact Us

Bioinformatics 2003: Short Course l The Bioinformatics of Brains: From Genes and Proteins to Behaviors Organized by Robert W. Williams, PhD A Society for Neuroscience short course presented at NEUROSCIENCE 2003   List of Contents Introduction A Neuroscientist's Guide to Genomic Resources. Robert W. Williams, PhD Center of Genomics and Bioinformatics University of Tennessee, Memphis, TN Knowledge Discovery in Medline and Other Databases. Neil R. Smalheiser, MD, PhD Psychiatric Institute University of Illinois at Chicago, Chicago, IL From Molecules to Brains: Navigating through Multi-resolution Imaging Data Using Knowledge-Guided Mediation. Maryann Martone, PhD Department of Neurosciences University of California at San Diego, San Diego, CA Design and Analysis of Microarray Experiments: Synthesizing Data for Research Questions. Elissa J. Chesler, PhD Center for Genomics and Bioinformatics, Depertment of Anatomy and Neurobiology University of Tennessee Health Science Center Memphis, TN Analysis and Interpretation of Microarray Data Michael F. Miles, MD, PhD and Robnet Kerns, PhD Department of Pharmacology and Toxicology Virginia Commonwealth University, Richmond, VA WebQTL: A Tour of Transcriptional Networks Robert W. Williams, PhD Center of Genomics and Bioinformatics University of Tennessee, Memphis, TN Protein Mixture Analysis by Tandem Mass Spectrometry    [see also PowerPoint presentation] Junmin Peng, PhD Department of Human Genetics, Center for Neurodegenerative Disease Emory University, Atlanta, GA Bioinformatics and Brain Imaging: Recent Advances and Neuroscience Applications Paul M. Thompson, PhD University of California, Los Angeles School of Medicine Los Angeles, CA, Managing Your Lab Data Flux: Getting Beyong Excel Robert W. Williams, PhD Center of Genomics and Bioinformatics University of Tennessee, Memphis, TN   Introduction Bioinformatic tools, tactics, and resources are having a profund impact on virtually all facets of neuroscience. Knowing what types of questions can be asked and answered using the latest generation of computational resources is one key to continued success in neuroscience. What would have been a year-long experiment can now often be reduced to a few keystrokes and clicks. We assume no special quantitative or computational background, only intense interest in discovering how you can take advantage of burgeoning bioinformatics resources. The course faculty will cover several key aspects of exploiting full genome sequence data, microarrays, mutagenesis research, rich 2-D and 3-D image data sets of whole brains and single cells, as well as massive functional-physiological and behavioral data sets. All faculty presentations will include practical advice and protocols and more advanced coverage of special topics. In addition to tours of online resources, we intend to give you advice on laboratory relational database systems, exploratory data analysis, the informatics and processing of microarray results, and strategies of data reduction of complex multidimensional data sets (clustering, self-organizing maps). You will be introduced to some of the latest tools for acquiring, analysing, and combining complex multidimensional image datasets from the level of synapses to sytoarchitectonic divisions. This short course will help you to learn more about exploring and exploiting online and in-lab resources to increase the pace and quality of your research. This full day course consists of a series ofg lectures by the faculty followed by informal workshops, and includes a syllabus booklet and matched online resources. Course Organizers: Robert W. Williams PhD, University of Tennessee Health Science Center. Faculty: Elissa J. Chesler, PhD, University of Tennessee Health Science Center; Carrolee Barlow M.D., PhD., Salk Institute; David L. Deitcher, PhD., Cornell University; Dan Geschwind, M.D., PhD., UCLA; Bruce S. Kristal, PhD., UCSD, Paul M. Thompson, PhD. UCLA Note to the Reader Please cite articles using this model: [AUTHOR'S LAST NAME, AUTHOR'S FIRST & MIDDLE INITIALS] (2002) [CHAPTER TITLE] In: Bioinformatics 2003: Short Course I The Bioinformatics of Brains: From Genes and Proteins to Behaviors. (Williams RW, eds) pp. [xx-xx]. Washington: Society for Neuroscience. All articles and their graphics are under the copyright of their respective authors. Cover graphics ©2003 Society for Neuroscience.

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